CDS

Accession Number TCMCG017C15266
gbkey CDS
Protein Id OMO92897.1
Location join(158809..158979,159097..159162,159250..159314,159400..159512,160637..160761,161045..161176,161285..161338,161584..161649,161760..161834,162675..162720,163473..163634,163718..163768,163922..164010,164375..164452,164560..164763,165191..165262,165505..165552)
GeneID InterPro:IPR005595
Organism Corchorus olitorius
locus_tag COLO4_17257

Protein

Length 538aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016323.1
Definition Translocon-associated protein (TRAP), alpha subunit [Corchorus olitorius]
Locus_tag COLO4_17257

EGGNOG-MAPPER Annotation

COG_category S
Description Protein XAP5 CIRCADIAN
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13119        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000160        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009873        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010099        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071369        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000030        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGGCATGGGAGACGGGTACGTGGGCACGGCCCAAGATGCGGTGAGAATCCGACGTCTGGAGAAGCAGAGAGAAGCCGAGCGCCGGAAAATCCAAGAGCTTAAATCCAAGTCTGCCTCCGGTAATGGCCAACCGGGTCTCCTTCAATTCGGTTCAAGTACTTCCGAGATTCTCGAGACTGCATTTAAGAAGGAAACTGTTGGTTTGGTCACAAGAGAGCAATATGTGGAGAAGAGAGTTAATATCCGAAACAAAATTGAAGAAGAAGAGAAGGAGAAACTGCAGAAGCTACAGCAAGAGGAGGAAGAGCTTCAGATGCAAAAGCGTAGAAAGAGGAAAGTTAAGGGGAATCCTCGACTATCTTTTACAGATGATATGGATAATGGAAGTGATGAGGAAGATGGAGAAAAGGAATTGGACCTAACATTTGAGCTTAGGCTTGACGAGGATGATCTTTCAGTGAACGGGAGGCAGAGGAGCAAGCTGAACGTGAAAGACTGCGGAAACAGTGGATTCGTGAACAGGAGCAAATTAAGAGTACGCAAGGGTGATACAATTGGAGAATTCCTTCGGGCAGTTCAGCAGCAACTTGCACCAGAGTTTAGAGAGATTCGAACAACTTCAGTGGAGAACCTGCTCTATGTGAAGGAAGATCTTATCATTCCTCATCAACATAGCTTCTACGAGCTTATTATTAACAAGGCTAGAGGCAAAAGTGGACCGCTTTTCCATTTTGATGTGCATGAAGATGTGCGAACGATAGCTGATGCTACAATTGAGAAGGACGAGTCTCATGCAGGCAAAGTTGTTGAGAGGCACTGGTATGAGAAGAACAAGCACATTTTCCCTGCGTCAAGATGGGAGGCGTTGGAAACCCCAGGCCGTCATAATATTGTCACATACACGGATCTTGCAAGGTGTCAATCAGAAGCAGACTCTGCTGTTCCTGAAGATGCTGAAGGAGGTGATCTAGGTATTGTTAGTGAGGATGTTCCAGATTTTGGTGATGGGAGTTTTAGCCCAGCTCCAGGAGTTGAAACTGTCTGTGTTTTCCCCAAAAATAGCGCCAAAACGGTTGTGGCTGGCGAAGAGACAGAACTCCTTGTTGGGATGGAAAATGTTGGTGAGTCACCTGTGAATGTCATCGCAATTAAAGCCAGCGTTCATCTCCCTTTTGATCATCGTTTGCTTGTTCAAAATCTTACTGCACAGGCCTTTAACAACGCAACTGTACCCACTTCGGCACAAGCTACTTTCCCTTACATCTTCGCTGTTAGCAAGTACTTACAGCCTGGAACTTTTGATCTTGTGGGTACCATTGTCTATGAAATTGACCAGCACCCATACCAAAATACATTCTATAACGGTACCATTGAAGTTGTTGAGGCTGGTGGTTTCATCAGTGTTGAGTCTGTTTTTCTTGTTACTCTTGGTATTGCGCTTCTTGTTCTCCTTGGTTTGTGGCTTCATGGTCAATTTCAGCGTATCTCCAAGAAAACTAAGCGGGCTCCAAAGGTGGAAGTTGGAACTAAGACTACCGATTCCTCATTGGATGAATGGCTCCAGGGAACTTCTTACACTCAGAACGCTTCCAAATCAAAGAAGAAGAAGTAG
Protein:  
MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKSKSASGNGQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQMQKRRKRKVKGNPRLSFTDDMDNGSDEEDGEKELDLTFELRLDEDDLSVNGRQRSKLNVKDCGNSGFVNRSKLRVRKGDTIGEFLRAVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEALETPGRHNIVTYTDLARCQSEADSAVPEDAEGGDLGIVSEDVPDFGDGSFSPAPGVETVCVFPKNSAKTVVAGEETELLVGMENVGESPVNVIAIKASVHLPFDHRLLVQNLTAQAFNNATVPTSAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQNTFYNGTIEVVEAGGFISVESVFLVTLGIALLVLLGLWLHGQFQRISKKTKRAPKVEVGTKTTDSSLDEWLQGTSYTQNASKSKKKK